INSIGHT // 47 Cross-Border

One Year of EU HTA Joint Clinical Assessment: Year-One Lessons for US Oncology and ATMP Sponsors

Abstract: The EU Health Technology Assessment Regulation has required a Joint Clinical Assessment for medicinal products with a new active substance indicated for the treatment of cancer and for advanced therapy medicinal products, wherever the centralised application was submitted after 12 January 2025, and the first year has produced both a record and a lesson. The record is modest in volume, thirteen assessments started and a first cluster of Joint Scientific Consultations, but demanding in substance. The lesson is that the outcome of a Joint Clinical Assessment is fixed long before the dossier is filed, by the comparators a sponsor selected in the pivotal trial and by whether the evidence answers the standard-of-care questions that up to twenty-seven national assessment bodies pose through the PICO process. For a US sponsor accustomed to building a single evidence package anchored to the Food and Drug Administration, the Regulation converts a late, separable European task into an early design constraint, and it does so without harmonising the national pricing and reimbursement decisions that ultimately determine access. This article maps how the assessment works after year one, why the PICO problem has proved as hard as the simulations predicted, and which decisions US oncology and ATMP sponsors now have to make before a molecule reaches the European Medicines Agency.
Plain Language Summary

Before a new medicine is paid for in Europe, national authorities assess how well it works compared with the treatments patients already receive. Until recently each country did this on its own. Since January 2025 the European Union runs a single, shared clinical assessment, the Joint Clinical Assessment, for new cancer medicines and advanced (cell and gene) therapies, and it will widen to rare-disease medicines in 2028 and, in 2030, to the other new medicines that go through the EU-wide authorisation route. The shared assessment does not set prices and does not decide reimbursement; each country still does that itself. What it does is force one clinical evidence dossier that must answer the questions of many countries at once. Those questions are framed as PICOs, short definitions of the patient population, the intervention, the comparator treatment, and the outcomes each country cares about, and because standards of care differ across Europe, a single product can attract many PICOs to answer inside a short window. A US company that develops a medicine mainly for the Food and Drug Administration, often testing it against a placebo, can find that its trial does not answer Europe's comparator questions. The comparator questions are in practice settled when the trial is designed, years before the dossier is written, and licensing and partnering deals rarely say who carries the cost and the risk of answering them.

Table of Contents
  1. The Assessment US Sponsors Cannot Read Off the FDA Map
  2. How the Joint Clinical Assessment Actually Runs
  3. The PICO Problem, One Year In
  4. The First Year's Record and the Runway Ahead
  5. Strategic Considerations for US Oncology and ATMP Sponsors

US oncology and advanced-therapy sponsors have long understood that approval by the Food and Drug Administration does not buy market access in Europe, and that a European marketing authorisation is only a permit to sell, not a decision to pay. What is new, and what most US development teams still underweight, is that a distinct clinical layer now sits between the European Medicines Agency (EMA) and the national bodies that fund medicines: the Joint Clinical Assessment. The EU Health Technology Assessment Regulation makes that assessment mandatory wherever a centralised marketing-authorisation application was submitted after 12 January 2025 for a medicinal product containing a new active substance whose therapeutic indication is the treatment of cancer, or for a medicinal product regulated as an advanced therapy medicinal product (ATMP), and the first year of operation has produced enough of a record to say what the assessment demands and where it bites.1Regulation (EU) 2021/2282 on health technology assessment [2021] OJ L458/1; joint clinical assessment as the first of four cooperation streams; date of application 12 January 2025. The lesson of that year is uncomfortable for a team working from an FDA-anchored playbook: the outcome of a Joint Clinical Assessment is largely fixed by trial-design decisions taken years before the dossier is filed, and a package built to satisfy one regulator against one comparator will not answer the questions the assessment poses on behalf of many.

1. The Assessment US Sponsors Cannot Read Off the FDA Map

There is no federal health technology assessment body in the United States, and that absence shapes how US sponsors reason about evidence. The FDA decides safety and efficacy; coverage and payment are settled downstream and in fragments, by the Centers for Medicare & Medicaid Services for federal programmes, by commercial payers for everyone else, and, in an advisory and non-governmental capacity, by the Institute for Clinical and Economic Review. None of these actors sits between approval and launch as a single gate, and none requires the sponsor to prove relative effectiveness against a defined standard of care before the product can be sold.2The United States has no centralised federal HTA gate: FDA approval under the FDCA is distinct from coverage, which is fragmented across CMS, commercial payers, and the non-governmental ICER. A US sponsor therefore tends to build one pivotal evidence package, optimised for the FDA, frequently against a placebo or a single active control, and to treat Europe as a later, separable set of national conversations.

The EU Health Technology Assessment Regulation collapses part of that separability. It creates four permanent streams of Member-State cooperation: the Joint Clinical Assessment of a technology's relative clinical effectiveness and safety, the Joint Scientific Consultation through which developers align evidence plans with assessors before pivotal trials, the identification of emerging health technologies, and voluntary cooperation on the questions the mandatory streams do not reach.3HTA Regulation (n 1), Chapter II, Sections 1 to 4 (the four streams of joint work), Art. 7(1) and (2) (scope and staggered phase-in), Art. 7(4) (Commission selection of certain high-risk medical devices and IVDs on a Coordination Group recommendation), with device classes under Art. 51 MDR and Art. 47 IVDR and the expert-panel gates in Art. 54 MDR and Art. 48(6) IVDR. The Joint Clinical Assessment is the load-bearing one, and its scope widens on a fixed schedule that a US planner should read as a calendar rather than a footnote: from oncology medicines with a new active substance and ATMPs on 12 January 2025, to orphan medicinal products from 13 January 2028, and to the remaining medicinal products within the centralised route from 13 January 2030. Certain high-risk medical devices and class D in vitro diagnostics are drawn in selectively rather than swept in automatically, and the choice is not the Coordination Group's to make: the Commission adopts it by implementing act, at least every two years and after seeking a recommendation from the Coordination Group. The eligible pool is narrower than the device classes suggest, because a class IIb or class III device qualifies only where an expert panel has given a scientific opinion in the clinical evaluation consultation procedure under Art. 54 MDR, and a class D diagnostic only where an expert panel has given its views under Art. 48(6) IVDR.

The consequence is that the clinical evidence question a US sponsor could once defer becomes a Union-level exercise timed to the EMA review itself. The assessment does not judge cost-effectiveness, and it does not set a price; it produces a scientific report on how the technology performs against the relevant comparators, and it leaves the value judgment to the Member States. That division of labour is the feature US teams most often misread, because it means the Joint Clinical Assessment can be demanding and consequential without ever producing the reimbursement answer the sponsor actually needs.

2. How the Joint Clinical Assessment Actually Runs

The mechanics are set out in the Commission Implementing Regulation of 23 May 2024, which lays down the detailed procedural rules for joint clinical assessments of medicinal products at Union level and the way they interlock with the EMA timetable.4Commission Implementing Regulation (EU) 2024/1381 of 23 May 2024 laying down, pursuant to Regulation (EU) 2021/2282 on health technology assessment, procedural rules for … joint clinical assessments of medicinal products for human use at Union level, as well as templates for those joint clinical assessments, OJ L, 2024/1381, 24.5.2024. The assessment runs in parallel with the centralised marketing-authorisation review, not after it. When a developer submits to the EMA, it also enters the joint clinical track: the Member State Coordination Group, working through a dedicated subgroup and a Commission-run secretariat, appoints an assessor and a co-assessor drawn from national HTA authorities in different Member States, and the scoping phase begins.5HTA Regulation (n 1), Art. 3 (Member State Coordination Group), Art. 8-12 (joint clinical assessment procedure, report, finalisation and publication), and Art. 16-21 (joint scientific consultation). Scoping is where the assessment defines the questions the dossier must answer, and it is national in origin: each participating Member State can specify the population, intervention, comparator, and outcomes, the PICO, that reflects its own standard of care.

The developer then compiles a single Joint Clinical Assessment dossier that must address the consolidated set of PICOs, and it must do so inside a window measured against the regulatory clock rather than the sponsor's convenience. The Implementing Regulation fixes that window at 100 days from notification of the Commission's first request, the request that carries the finalised assessment scope, and at 60 days where the marketing-authorisation application runs under the accelerated procedure or where the assessment concerns a variation corresponding to a new therapeutic indication; the secretariat may extend it only in justified cases, and never past the outer limit of 45 days before the envisaged opinion of the Committee for Medicinal Products for Human Use. Either period is short for analyses that may require indirect comparisons or subgroup work that were never designed into the trial.6On PICO consolidation, the Coordination Group's Guidance on the scoping process V1.0 (13 November 2024); on the dossier deadlines, Art. 12(2) and (3) of the JCA Implementing Regulation (n 4); industry commentary in EFPIA (4 November 2025) and ICON (13 March 2026). The assessor and co-assessor then produce a draft assessment report, which is refined through comment and finalised by the assessment subgroup at the latest on the date the Commission adopts the decision granting the marketing authorisation, with endorsement by the Coordination Group falling no later than 30 days after that decision, after which the Commission publishes the endorsed report on the publicly accessible webpage of the health technology assessment IT platform.

What the Member States must then do with the report is the provision US counsel should read most carefully. Under Article 13 of the Regulation, Member States must give the published joint report "due consideration" in the health technology assessments they carry out nationally, must annex it and the developer's dossier to the national file, and must refrain from asking the developer at national level for information already submitted at Union level. What Article 13 does not say is that a Member State may not weigh the clinical evidence again: it expressly preserves each Member State's competence to draw its own conclusions on the overall clinical added value of the technology in its own healthcare context, and the reservation of exclusive national competence over pricing and reimbursement sits in Article 1(2) rather than in Article 13.7HTA Regulation (n 1), Art. 13(1) (Member States give the published joint clinical assessment report due consideration and do not re-request evidence already submitted at Union level); Art. 1(2) (exclusive national pricing and reimbursement competence); Art. 9(1) (no value judgment in the report). The report is therefore an input each Member State must take into account and a conclusion none of them is bound by: it removes the duplicated request for the same clinical evidence across national bodies, but it does not remove the twenty-seven national decisions that follow, and it does not stop a national authority from reaching a different conclusion on value once the shared clinical facts are in front of it.

3. The PICO Problem, One Year In

The single hardest feature of the first year was the one the pre-implementation simulations had flagged: the PICO. Because the comparator in a PICO is the treatment a given health system actually uses, and because standards of care in oncology differ across Europe, one product can attract a large and heterogeneous set of PICOs, each demanding a comparison the pivotal trial may not have made. Assessors consolidate overlapping PICOs, but the industry account of that consolidation is that it retains considerable flexibility, that the rationale behind the initial proposals and the consolidation decisions following them is not visible enough for a developer to anticipate the scope, and that a consolidated PICO can still set an evidence standard the dossier cannot satisfy.

The Joint Clinical Assessment does not test the evidence a sponsor chose to generate; it tests the evidence twenty-seven health systems wish had been generated. The gap between those two is the PICO, and it is fixed at trial design, not at submission.

For a US-anchored programme the gap is structural rather than incidental. A trial designed to secure FDA approval against placebo, or against the single comparator most relevant to the US market, will not carry head-to-head data against the several active therapies that European systems treat as standard, and no volume of dossier drafting inside the statutory dossier window can retrofit a comparison that the protocol never contemplated. The available answers, indirect treatment comparisons built from the published literature, are precisely the analyses assessors scrutinise hardest, and they carry recurring evidentiary weaknesses of their own: risk of bias in single-blinded trials, questions over the transferability of non-European trial populations, and the handling of missing data. The Joint Scientific Consultation exists to close exactly this gap by aligning the evidence plan with assessors before the pivotal trial locks, but it is rationed by design: it is open only while the clinical studies are still in the planning stage, it is offered in published request periods, and where eligible requests exceed the planned number the Coordination Group selects among them against the criteria in Art. 17(3). Its outcome document gives rise to no legal effect on the Member States, the Coordination Group, or the developer, and does not prejudice the joint clinical assessment that follows. A sponsor that reaches it after the protocol is fixed has arrived too late; a sponsor that reaches it in time has an opinion, not an assurance.

4. The First Year's Record and the Runway Ahead

The volume of the first year was modest and the substance was not. The Member State Coordination Group reported that it started thirteen joint clinical assessments on new oncology products and ATMPs in 2025, selected seven joint scientific consultations across two request periods and completed four of them, and recorded thirty-eight patients, carers, or clinicians involved in the joint clinical assessments and ten in the joint scientific consultations by year end.8Member State Coordination Group on Health Technology Assessment, Annual Report 2025 (adopted pursuant to Art. 6(4) of the HTA Regulation (n 1); published 16 February 2026): 13 joint clinical assessments started; 7 joint scientific consultations selected across two request periods, 4 completed. The number of assessments sat below the Coordination Group's own pre-launch estimate, which had put 2025 at seventeen assessments for medicinal products with new active substances indicated for the treatment of cancer and eight for advanced therapy medicinal products, cancer-indicated advanced therapies counting inside the seventeen. The Coordination Group published no cause for the gap, and the final figure in any year turns on how many valid marketing-authorisation applications the European Medicines Agency receives. Even at that volume, the operational strain of the PICO and dossier process was the dominant theme in the practitioner commentary, and the transparency of the reasoning behind published scopes was a recurrent complaint.

The runway ahead is where the strain compounds. The 2026 work programme adopted by the Coordination Group on 28 November 2025 projects a substantial increase: around thirty-five assessments of medicinal products with new oncology active substances, around fifteen of advanced therapy medicinal products, three on new-indication variations, and approximately five on a first selection of high-risk medical devices and in vitro diagnostics, the first of those expected to start in June 2026; the orphan expansion then lands in January 2028 and the all-products expansion in January 2030.9Member State Coordination Group on Health Technology Assessment, Annual Work Programme 2026 (adopted 28 November 2025): around 35 oncology and 15 ATMP assessments, 3 on variations, and approximately 5 on a first selection of medical devices and IVDs. For a US sponsor the practical reading of that calendar is that the assessment stops being an oncology-and-ATMP curiosity and becomes the default European gate for every new active substance within the planning horizon of a molecule now entering the clinic.

5. Strategic Considerations for US Oncology and ATMP Sponsors

The organising question the Joint Clinical Assessment puts to a US sponsor is not how to write the dossier but how early the evidence that the dossier will need must be designed. If the comparators that satisfy the European PICOs are chosen in the pivotal-trial protocol, and if the window to compile the dossier is too short to generate anything the trial did not, then the decisive move is the one made at protocol design, when a US team is usually reasoning about the FDA alone. So the first question is whether the trials being planned today for a molecule that will reach the EMA in 2028 or later are being built with the European comparator landscape and the Joint Scientific Consultation in view, or whether the European evidence problem is still being treated as a post-approval task that a market-access function will pick up after the fact.

A second question runs through the deal base rather than the development plan. When a US biotech out-licenses an oncology or cell-and-gene asset to a partner with European reach, or in-licenses one, who bears the cost and the responsibility of the Joint Clinical Assessment dossier, who controls the comparator strategy and the timing of any scientific consultation, and how are the reps and warranties about the adequacy of the clinical evidence framed when the standard against which adequacy is measured is set by national bodies rather than by the FDA? Milestones and valuations keyed to European launch increasingly depend on an assessment whose difficulty the parties may not have priced, and diligence on an inbound asset now has to ask not only whether the pivotal data support approval but whether they can survive a PICO-driven comparison the originator never ran.

A third question is one of expectation management about what the assessment actually delivers. Because the joint report harmonises the clinical dossier but not the reimbursement decision, a favourable Joint Clinical Assessment does not guarantee a favourable national outcome, and divergent decisions across Member States on the same shared evidence are not a malfunction of the system but a designed-in consequence of Article 13. How should a launch sequence, a pricing corridor, and an investor narrative be built so that they survive the possibility that the same clinical report yields access in one Member State and refusal in another, and that the two happen at different times?

A fourth question is the one a US team is least likely to frame for itself, and it is where a Swiss adviser tends to see the whole board. Europe is not the European Union for these purposes. Switzerland is outside the EU and the EEA and outside the Joint Clinical Assessment entirely; Swiss marketing authorisation runs through Swissmedic under the HMG, and Swiss pricing and reimbursement through the Spezialitätenliste administered by the BAG under the KVV, on a timetable and an evidentiary logic of their own, and the United Kingdom runs appraisals of its own, principally through NICE, with Scotland advised separately by the Scottish Medicines Consortium.10Switzerland is outside the EU HTA framework: Swissmedic authorisation under the Heilmittelgesetz (HMG, SR 812.21) and the Spezialitätenliste, drawn up by the BAG under Art. 52(1)(b) KVG (SR 832.10) on the admission conditions in Art. 65 ff. KVV (SR 832.102), run on a separate track. A US sponsor that treats "Europe" as a single assessment market will build one comparator story and find that it answers the EU joint process, misses the Swiss and UK appraisals, and still faces twenty-seven national reimbursement decisions behind the joint report. Whether a global evidence plan optimised for the EMA also serves the Swiss and UK routes, and whether the comparators chosen for the European PICOs are the ones those separate systems will demand, are questions that cannot be read off the FDA map and that grow harder to answer once the pivotal trial has locked. These are questions that require analysis tailored to the specific asset, therapy area, and commercial footprint.

REFERENCES

01
Regulation (EU) 2021/2282 of the European Parliament and of the Council of 15 December 2021 on health technology assessment and amending Directive 2011/24/EU [2021] OJ L458/1 (HTA Regulation). The Regulation establishes four permanent forms of Member-State cooperation, of which the joint clinical assessment is the first; it entered into force on 11 January 2022 and has applied from 12 January 2025.
02
The United States operates no centralised federal health technology assessment gate. Marketing approval under the Federal Food, Drug, and Cosmetic Act (21 U.S.C. § 301 ff.) is legally and institutionally distinct from coverage and payment, which are determined separately by the Centers for Medicare & Medicaid Services for federal programmes and by commercial payers otherwise; the Institute for Clinical and Economic Review conducts value assessments in a non-governmental, advisory capacity only. No US actor conditions market entry on a demonstration of relative clinical effectiveness against a defined standard of care.
03
HTA Regulation (n 1), Chapter II, Sections 1 to 4 (the four streams of joint work: joint clinical assessments, joint scientific consultations, emerging health technologies, and voluntary cooperation on health technology assessment); Art. 7(1) and (2) (health technologies subject to joint clinical assessment and the staggered phase-in: medicinal products with a new active substance whose therapeutic indication is the treatment of cancer and medicinal products regulated as advanced therapy medicinal products, where the marketing-authorisation application is submitted after 12 January 2025; orphan medicinal products from 13 January 2028; the remaining medicinal products within Art. 7(1) from 13 January 2030). Art. 7(1), points (c) and (d), and Art. 7(4) give the selection of medical devices and in vitro diagnostic medical devices to the Commission, by implementing act and at least every two years, after seeking a recommendation from the Coordination Group; Art. 7(5) governs only the comitology procedure for those acts, and for the acts under Art. 7(3), by which the Commission, on a recommendation from the Coordination Group, brings a medicinal product into scope earlier than the Art. 7(2) dates where it has the potential to address an unmet medical need or a public health emergency or has a significant impact on healthcare systems. Eligibility is cumulative: a device must be class IIb or III under Art. 51 of Regulation (EU) 2017/745 (MDR) and have been the subject of an expert-panel scientific opinion in the clinical evaluation consultation procedure under Art. 54 MDR; an in vitro diagnostic must be class D under Art. 47 of Regulation (EU) 2017/746 (IVDR) and have been the subject of expert-panel views under Art. 48(6) IVDR.
04
Commission Implementing Regulation (EU) 2024/1381 of 23 May 2024 laying down, pursuant to Regulation (EU) 2021/2282 on health technology assessment, procedural rules for the interaction during, exchange of information on, and participation in, the preparation and update of joint clinical assessments of medicinal products for human use at Union level, as well as templates for those joint clinical assessments, OJ L, 2024/1381, 24.5.2024 (JCA Implementing Regulation). It is adopted under Art. 15(1), points (a) and (c), Art. 25(1), point (b), and Art. 26(1) of the HTA Regulation (n 1), and it fixes the scoping, dossier-submission, assessment, and reporting procedure and its synchronisation with the centralised procedure under Regulation (EC) No 726/2004.
05
HTA Regulation (n 1), Art. 3 (Member State Coordination Group on Health Technology Assessment and its subgroups, with the Commission acting as secretariat under Art. 3(6)), Art. 8-12 (initiation, the appointment by the designated subgroup of an assessor and a co-assessor from different Member States, the scoping exercise, the reports and the developer's dossier, the assessment process, and the finalisation, endorsement and publication of the reports), and Art. 16-21 (joint scientific consultation, which under Art. 16(5) may take place in parallel with European Medicines Agency scientific advice while the respective remits stay separate, and whose outcome document gives rise to no legal effect under Art. 16(3)).
06
On the consolidated-PICO practice, see Member State Coordination Group on Health Technology Assessment, Guidance on the scoping process V1.0 (13 November 2024, adopted 28 November 2024 pursuant to Art. 3(7), point (d), of the HTA Regulation (n 1)), section 3.2. The dossier template is Annex I to the JCA Implementing Regulation (n 4), imposed by Art. 12(1) of that Regulation; the submission deadlines are in Art. 12(2) and (3), read with Art. 10(1) of the HTA Regulation (n 1). For the industry account of the transparency of assessor PICO proposals and of the discretion left in consolidation, see EFPIA, ‘From guidance to implementation: EFPIA’s reflections on EU HTA scoping & PICO exercises’ (4 November 2025). For the “PICO anxiety” observed in the first year, see ICON plc, ‘Lessons learned in EU HTA Regulation’s first year’ (13 March 2026), which describes the window in round terms as ninety days rather than by reference to Art. 12(2) of the JCA Implementing Regulation (n 4).
07
HTA Regulation (n 1), Art. 13(1), points (a) to (e). When carrying out a national health technology assessment, Member States shall give due consideration to the published joint clinical assessment reports, annex the developer's dossier and the published report to the national documentation, and shall not request at national level information, data, analyses or other evidence already submitted by the developer at Union level under Art. 10(1) or (5). Art. 13(1), point (a), expressly leaves untouched the Member States' competence to draw their conclusions on the overall clinical added value of a health technology in the context of their specific healthcare system. The reservation of exclusive national competence over pricing and reimbursement decisions sits in Art. 1(2), not in Art. 13; the rule that the reports carry no value judgment and no conclusion on overall clinical added value sits in Art. 9(1).
08
Member State Coordination Group on Health Technology Assessment, Annual Report 2025 (adopted pursuant to Art. 6(4) of the HTA Regulation (n 1); published 16 February 2026). The Group reported that it started thirteen joint clinical assessments on new oncology products and advanced therapy medicinal products in 2025, selected seven joint scientific consultations across two request periods and completed four of them, and recorded thirty-eight patients, carers, or clinicians involved in joint clinical assessments and ten in joint scientific consultations by the end of 2025. Compare Member State Coordination Group on Health Technology Assessment, Annual Work Programme 2025 (adopted 28 November 2024), section 2, estimating seventeen joint clinical assessments for medicinal products with new active substances indicated for the treatment of cancer and eight for advanced therapy medicinal products.
09
Member State Coordination Group on Health Technology Assessment, Annual Work Programme 2026 (adopted 28 November 2025 pursuant to Art. 6 of the HTA Regulation (n 1)), section 2: around 35 joint clinical assessments of medicinal products with new active substances indicated for the treatment of cancer, around 15 of advanced therapy medicinal products, 3 on variations within Art. 7(1), point (b), and approximately 5 on a selection of medical devices, the first expected to start in June 2026; section 4 plans 8 to 12 joint scientific consultations on medicinal products and 2 to 5 on medical devices. The orphan-medicine expansion follows on 13 January 2028 and the all-products expansion on 13 January 2030.
10
Switzerland is neither an EU nor an EEA Member State and does not participate in the joint clinical assessment. Swiss marketing authorisation is granted by Swissmedic under the Bundesgesetz über Arzneimittel und Medizinprodukte (Heilmittelgesetz, HMG) vom 15. Dezember 2000 (SR 812.21); pricing and reimbursement follow the Spezialitätenliste, which the Bundesamt für Gesundheit (BAG) draws up under Art. 52(1)(b) of the Bundesgesetz über die Krankenversicherung (KVG) vom 18. März 1994 (SR 832.10), on the admission conditions in Art. 65 ff. of the Verordnung über die Krankenversicherung (KVV) vom 27. Juni 1995 (SR 832.102). The United Kingdom likewise appraises separately, principally through the National Institute for Health and Care Excellence, with medicines for NHSScotland advised on by the Scottish Medicines Consortium. None of these systems is bound by or aligned to the EU joint clinical assessment.

The comparators that decide a Joint Clinical Assessment are chosen in the trial protocol, years before the dossier is due. The earlier that European evidence question is on the table, the more of it is still in the sponsor's hands.

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